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Mutant Lines
GT19697

GT19697

CSHL Arabidopsis genetrap mutant lines

Original: GT19697

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19697

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 28555238 [Map]; Strand: c
- AT1G76100.1 - [+] show detail - plastocyanin 1
  Distance: -470; Region: promoter
- AT1G76110.1 - [+] show detail - HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
  Distance: 0; Region: exon6 (3UTR)

TGACAAACGG CAAGGCTTTT TAGGTGATTT ATTTAAAACG GCAAGTCGTT 
TTGTTGTAGG TCGTTTCTCT CTTTTAAGAT TGGACGCCTC GCCGTTTCTT 
TTATTTTCTA GCTTATTGTA GTTGTCCATG CTTGCTTAAC TAGGCTCAGT 
GAGAGGCTAG ACTTGCCAAA CTTGAAGAGT CTTTATTTAT TTAAGAATTT 
TAGATGTTCT AATGTATTAA TCCTTTTTCG TAAACCTTTC CTGTTAAACA 
AGAGGTTTAT GTTGCATGTT AAAAAAGAGG TTTAGGTTAT ATTAGCAATT 
TAGCATTCGA TTCGTTGGTT AGTAACTAAG TAATATAAAT ACCACAAGAA 
CAAGAAATAC TAATGAAAAC TTGGAATGTT CAAAGTCTCC TTATCTACTT 
ATGCAACGTT AGACAAAGCT ATCAAACAAT GCCACGTCAC CTCACAAAAC 
ATCTAGGGTA ACCAATCACA TGCAGATAAC TCTCTCGCTT TATTTTCTCT 
TCAAATCTTA TCAAAAATCC CATAATGTTT TCATTTCTTT ACAAGTGATC 
AACAAAACAC CCCAAAAAGT AAAGAAAATG GCCGCAATTA CATCAGCTAC 
CGTCACCATC CCTTCTTTCC CCGGCACTAA AGCTCGCCGT CAGCTCAAAA 
CCTAAGACAT TATCCACCA

AT1G76100.1

Model type: Protein coding
Short Description: plastocyanin 1
Curator Summary: One of two Arabidopsis plastocyanin genes. Expressed at 1/10th level of PETE2. Does not respond to increased copper levels and is thought to be the isoform that participates in electron transport under copper-limiting conditions.
Computational Description: plastocyanin 1 (PETE1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G20340.1); Has 1305 Blast hits to 1299 proteins in 244 species: Archae - 140; Bacteria - 448; Metazoa - 0; Fungi - 0; Plants - 204; Viruses - 5; Other Eukaryotes - 508 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G76110.1

Model type: Protein coding
Short Description: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Computational Description: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (TAIR:AT1G04880.1); Has 3338 Blast hits to 2805 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2430; Fungi - 276; Plants - 321; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link: InterPro Scan - TAIR