Home
Mutant Lines
GT19715

GT19715

CSHL Arabidopsis genetrap mutant lines

Original: GT19715

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19715

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 452623 [Map]; Strand: c
- AT4G01037.1 - [+] show detail - Ubiquitin carboxyl-terminal hydrolase family protein
  Distance: 0; Region: exon2 (CDS)
- AT4G01040.1 - [+] show detail - Glycosyl hydrolase superfamily protein
  Distance: -746; Region: promoter

TCTCTTAGGG GTTTGGGTAA GTACAGGAGA GATTGGGGTT TGAAGAACGT 
CTGCGGTTTA TAGCTCTGCT TAGGAGATAG CCTGGTGTGT TTGAGATAGT 
TGAAGAAGGA GCTTATTCTT TGAGATTTAA GATGACATCT GAGGCTGACA 
GGTTGTACCT TGACTAATTG AGGATTAAGA ATGAGCTTGA TTATGTACTG 
GTTGTTACGC TGAGGAAAGT GGTGATGATG TCTATTGATA GGCGGATATT 
GTTGGAGAAC ATTTCCCATT TGAAGACTGA TTTAAGGGTT CCGGTAGAGT 
TCCGCGACTC GATTTGTCAC CGTTACCCGC GATATTTCCG TGAGGTTCCT 
ACGCCTACAG GTCCGGCTTG AGATTGACTC ACTGGTATCC TGAGCTTGCT 
ATGTCTCCTG TCGAGCTATC AGAGGATGAT AATAGGACTA GAGAGTCAGA 
AGAAAGGAAT TTGATTATTG ATAGACCACC TAAGTTCAAC AGGGTTAAGC 
TTCCAAGGGG TCTCAATCTT TCAAAGAGTG AGACGAGGAA GATATCTCAG 
TTCCGTGACA TGCAGTATAT ATCTCCTTAC AAGGATTTCT CCCACTTGAG 
GTCGGGAACA CTCGAGAAAG AAAAGCATGC TTGTGGGGTT ATTCATGAGC 
TTTTGAGCTT AACGACTGAG AAAAGAACGC TGGTGGATCA CTTGACTCAT 
T

AT4G01037.1

Model type: Protein coding
Short Description: Ubiquitin carboxyl-terminal hydrolase family protein
Computational Description: what's this factor? (WTF1); CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT5G62990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01040.1

Model type: Protein coding
Short Description: Glycosyl hydrolase superfamily protein
Computational Description: Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain (InterPro:IPR001223), Chitinase II (InterPro:IPR011583), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 828 Blast hits to 823 proteins in 284 species: Archae - 0; Bacteria - 578; Metazoa - 178; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Link: InterPro Scan - TAIR