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GT19803

CSHL Arabidopsis genetrap mutant lines

Original: GT19803

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19803

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17189395 [Map]; Strand: c
      • AT2G41220.1 - [+] show detail - glutamate synthase 2
        Distance: 644; Region: intergenic
      • AT2G41225.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1633; Region: intergenic
    Flanking Genome Sequence: GT19803 - 5-prime edge 
    CTTTATCCCT GCCAGTTCCA TTATTTGGTG CTTTAAGAAC TTTCGAATTT 
    TCGTGTTTAA GAACTTTCTT TATTTTAAAG CTTGGAAAAT TTCATGGGAC 
    AAGAAAAAAT TGACGTTAAG ACACCGACGT TTACACGTGT CAGCTATATT 
    TCTGTTGTGT TTACCACGGG AGAGCTGAGA CAACAGAGAA TAAACATCAG 
    ACTTAATGGA GTTTTTGTCA ACGAACACAC ACGTACCTTT CTCGTGACCC 
    ATTCCACTTA CCTATATGGG GACAAACATC GGTTTCACGA TATATTGTCT 
    TAAAACCTTT AAACGTTCAA CGTACATGCA TTACTAGAAG AAATTCTCGA 
    GACTTTTTTT TTCCGTAAAA AAATCAAAGA CCTTTTTTTT TTTTTTTTT

AT2G41220.1

Model type
Protein coding
Short Description
glutamate synthase 2
Curator Summary
Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root.
Computational Description
glutamate synthase 2 (GLU2); FUNCTIONS IN: glutamate synthase (ferredoxin) activity; INVOLVED IN: oxidation reduction, nitrogen compound metabolic process, glutamate biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1); Has 17295 Blast hits to 17192 proteins in 1999 species: Archae - 278; Bacteria - 5572; Metazoa - 117; Fungi - 161; Plants - 174; Viruses - 0; Other Eukaryotes - 10993 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41225.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR