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GT20003

CSHL Arabidopsis genetrap mutant lines

Original: GT20003

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20003

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17877762 [Map]; Strand: c
      • AT3G48270.1 - [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 26
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT20003 - 5-prime edge
    CTGGGTATGT GGTGATCTCC TAATCTGACA TCTTGTGTTG ATTCGTGAGG 
    AACCATCAAT GGAAGTGGAG GATGGAGCCT GAGTGCCTCT TTGATTACAG
    CTTTTAAGTA GCTCATGTTT TGAATTTCTT CTTCTGACAC ACTTGATTTA
    TCCTTGCAAA TCGTGCGGAC TTCTTCTTGG AGTCTTTTCA GACACTTTGG
    ATGACGTAGA AGCTCTGTCA TTGCCCATTC CATAAGTGTA GACGATGTAT
    CCGTACCACC CACAAAAACA TTCTGAAAAG TTAAAACCAA AACAAGAACT
    ACTGTTATAT ACTTACTAAC ACATCATGTT GTAAAAAAAA AAAACTTTAC
    CCAAAAAAAC TTCAAAATTC TAAATTGGTA TCTTTCAAAA GGGGGTTTCC
    TCCCCATGAA AATTGCCTTT ATGCAAACCC GGTTAATTTC AAACCCGACG
    GTCTTATCTT TTTGAAAAGC GAGCAATACA TCCACAAAAT CAGTCATATC
    TCTTTTTCCA TCAACATGAT CTTGCACAAT TCTTTCAAAA AATTTATCAA
    CATCTTTGGC CGTCTTT

AT3G48270.1

Model type
Protein coding
Short Description
cytochrome P450, family 71, subfamily A, polypeptide 26
Curator Summary
putative cytochrome P450
Computational Description
"cytochrome P450, family 71, subfamily A, polypeptide 26" (CYP71A26); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 22 (TAIR:AT3G48310.1); Has 32796 Blast hits to 32545 proteins in 1644 species: Archae - 46; Bacteria - 3223; Metazoa - 11825; Fungi - 7001; Plants - 9620; Viruses - 3; Other Eukaryotes - 1078 (source: NCBI BLink).
Link
InterPro Scan - TAIR