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Mutant Lines
GT20008

GT20008

CSHL Arabidopsis genetrap mutant lines

Original: GT20008

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20008

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 4123120 [Map]; Strand: w
- AT3G12920.1 - [+] show detail - SBP (S-ribonuclease binding protein) family protein
  Distance: 0; Region: exon2 (CDS)

TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAACCC AGATGAGATA 
CGGCACCGTT CCGACGTTTA ACCCCACCGT GGAATGTCAA ACTTCTCTGT 
TTAACCCAAT CTACAACATC TCACCAGTCG ATGGTTTGGT TCATCAATCC 
ATGAAACCAA CGATACAGTC CGTTGATAGT TCTCTCACAT TCAACAGCGA 
CAACAACGTC GATTTTCTTC GTCCTGTGTC GTCGAGAAAA CGTTCTAGAG 
AAGAATCCGT TGTTCTAAAC CCTTCCGCTT ATATGCAAAT TCAGAAAAAT 
CCCACCGATC CTCTTCT

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 17877484 [Map]; Strand: c
  - AT3G48270.1 - [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 26
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: GT20008 - 5-prime edge
```
AGTTAAAACC AAAACAAGAA CTACTGTTAT ATACTTACTA ACACATCATG 
TTGTAAAAAA AAAAAATTTT
```

AT3G12920.1

Model type: Protein coding
Short Description: SBP (S-ribonuclease binding protein) family protein
Computational Description: SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G48270.1

Model type: Protein coding
Short Description: cytochrome P450, family 71, subfamily A, polypeptide 26
Curator Summary: putative cytochrome P450
Computational Description: "cytochrome P450, family 71, subfamily A, polypeptide 26" (CYP71A26); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 22 (TAIR:AT3G48310.1); Has 32796 Blast hits to 32545 proteins in 1644 species: Archae - 46; Bacteria - 3223; Metazoa - 11825; Fungi - 7001; Plants - 9620; Viruses - 3; Other Eukaryotes - 1078 (source: NCBI BLink).
Link: InterPro Scan - TAIR