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GT20049

CSHL Arabidopsis genetrap mutant lines

Original: GT20049

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20049

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4109999 [Map]; Strand: c
      • AT3G12910.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT20049 - 5-prime edge 
    TGGCTGTAGG GAGACGAAAC TCGTGCATCA TCCAATCCGT CTTGTTTCCT 
    TTCCCGGCGC TTCCTAGGTA ATAAACGAGT GTCTTCTTTA GACCGATCAC 
    GGCTTTGTTG GATTCATCGG AATAGACAGG CTTGTCTATC CCTGTGGCTT 
    TCCAGAAACC GGAACCAGTC ACTCGGTTCG GTCTTATGCT GTTTCTGTGT 
    TTCCTTCCTC TCTTACAAAA GAAGTAGCTC TTCTTCTCTC TCGACCAAAA 
    AAAAGCCCAA AATTGGAATC CTCCATCCGG GTTGGGAAAT TTAAAAAACC 
    CCATAACCAG TCAAAAAAAG AAACCCGGGG GAAGAAGGTT TTCCAACATT 
    TTTCCTTTCC TTTTTTATTT TTTTCCGGGG CCCGTTTTTC AACCCTTTTG 
    GGGGGGGAAA GCCGGAAATT TTCTTTTTCC GGGGGAAAAA CAAATTTAAA 
    CCCGGGGAGG AAGGGAAACC CGAAGGGGGG GAACAAATTT AAAAAACCAA 
    AGAAATTTAG GAACCAAAAA ACCCCCGAAA ACCAAAAAAA AAACCAAAAA 
    AAAAAAAAGG CACCTAAAGT TTCCAAAA

AT3G12910.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 42 (TAIR:AT2G43000.1); Has 2920 Blast hits to 2915 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR