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GT20064

CSHL Arabidopsis genetrap mutant lines

Original: GT20064

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20064

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4107147 [Map]; Strand: c
      • AT3G12900.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 1035; Region: intergenic
      • AT3G12910.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: -2228; Region: intergenic
    Flanking Genome Sequence: GT20064 - 5-prime edge 
    TGACCCCAGT TGTTCTTGTT GGACATCTTC CTCTCAATCT ATTATAAACT 
    TTTTTCGGCA CTAAAAAAAC TCTTATTAAT TTGCATGGAG GTGAAAATAT 
    TATCGGGGAA AAGTAAACCA TAACACCTAT ATTTATTTTA TGCATGTATA 
    GAAACATATT TAACCACACT TTAAGATTTT GGTATACTCT CATGTATGCT 
    CCAAACGCAA GAGAGAGAAA AATTCATGTA ACGATTCCAT ATTTAAACAC 
    GTTATTTATA TAGAATTATT CGAATTTGTG GTGAGTTAAC GAGTTTTAAT 
    TGGGCGTGAG TGGAAAACTT TAGACTTTAT AAAAATTAAA ACAGGAAAAC 
    TAAAGAAGGA TGCAATGGCA CGAGTTTTGA AAATCCGTAT AAATCTTACG 
    TCACACTTTT TTTTTTTTTC CCCCAAAACC AAAATTTTTT AAAAAAACCA 
    TTTTTTTCCC CCCCA

AT3G12900.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8653 Blast hits to 8615 proteins in 1001 species: Archae - 0; Bacteria - 1126; Metazoa - 119; Fungi - 1049; Plants - 4930; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G12910.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 42 (TAIR:AT2G43000.1); Has 2920 Blast hits to 2915 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR