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GT20157

CSHL Arabidopsis genetrap mutant lines

Original: GT20157

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20157

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT20157 - 3-prime edge
    TGGTCGAGAG AGATGAATAT
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4109112 [Map]; Strand: c
      • AT3G12910.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: -263; Region: promoter
    Flanking Genome Sequence: GT20157 - 5-prime edge
    TAAATATGAC GCTTTTACCT TTCGCATTAT TAGGACCCTT TGAAAACGCT 
    AAGGAGAGGA CTGACTTTTT GACACCAAAA TTTAATTTTT GTGTGTCCTC
    TTCCAAAATG TCTGACGAGT ATTCATTGTT ACAACATTAA CTTCTTCTAG
    ACCCATCATT AATTGTTTGC ATATTATATT CTTGGCCACC ACAAAACATC
    TACTAATCAT CATGACGTTA AACGCATAAA TCCGACTTTG TGCTCGTAAA
    GGTAAGATTT GTATTGCTTC GTTTGGAGAT TTTAACTTGG AGTCTTGGAG
    AGATCAACAA ACTAAAAAGA AAAAATATGA ATATTGTTAC ATTTTTTATT
    TTTCTATTTG GTAATTTCTC CGAAATTGAC AATGACAGAT CCACCAAATA
    AAAACCGAAT ATTACCTGTC AGTTCCTTTC TCACTTCTAC AAAATATTTT
    ACTGGTTATT GTAGTTATTA GTTAAGCTTG GTTTTTGAAC TTGAAAGTAA
    TTGGTCTTAA TTTTAACTCG TCTCTTGTCC CTTTATTTTA ATATCGTTGC
    AACTGATAAC TACAGCTACG GGATG

AT3G12910.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 42 (TAIR:AT2G43000.1); Has 2920 Blast hits to 2915 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR