Home
Mutant Lines
GT20175

GT20175

CSHL Arabidopsis genetrap mutant lines

Original: GT20175

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20175

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 25328455 [Map]; Strand: w
  - AT5G63140.1 - [+] show detail - purple acid phosphatase 29
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT20175 - 5-prime edge
```
CTACAAGTGG CGGATACGCA TTTTGCTAAC GGCGCTAAGA CGCAGTGTCA 
AAATGTTCTT CCTAGCCAGA GAGCTCGTTG CTCAGACCTC AACACCACCA 
TC
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 4107150 [Map]; Strand: c
- AT3G12900.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: 1038; Region: intergenic
- AT3G12910.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
  Distance: -2225; Region: intergenic

TGGAGCTGGC CATATTGCAG TCATCCCGAA TTAGAACATA CGGTAACGAA 
CCGGGATCAT CCCGATTAAA AACGGGATCC CGGTGAAACG GTCGGGAAAC 
TCATGTTCAG AGTTAACGGC GAGATCAAGA TACTACAAGT GGCGGATACA 
CATTTTGCTA ACGGCGCTAA CTACTCAGAG TCAGAATGTT CTTCCTAGCC 
GCAGAGCTCG TTGCTCAGAC CTCAACACCA CCATCTTCTT CTCACTCGAC 
CACATTGGTT ATAGACAAGT ATTCAAATTT GCGGAGAGTT AACGAGTTTT 
ATTTGCCCAT GCGTGGAAAA CTTTAGACTT TATAAAAATT AAAACAGGAA 
AACTAAAGAA GGATGCAATG GCACGAGTTT TGAAAATCCG TATAAATCTT 
ACGTCACACT TTTTTTTTTT TTCCCCCCCC CCCAAAGGGG GGGGAGTAAC 
CAATTTACTT CCCTCACAAA AGAGATGAGT CGGAGAAGAA CCATGTGTTG 
GTGTTGTTGG TCTACTAGAG AAAGGTGTTG TTGATTCTGA AGTTCTTCCA 
TGTTTGATAT TTTTCTTAGC TG

AT3G12900.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8653 Blast hits to 8615 proteins in 1001 species: Archae - 0; Bacteria - 1126; Metazoa - 119; Fungi - 1049; Plants - 4930; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G12910.1

Model type: Protein coding
Short Description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 42 (TAIR:AT2G43000.1); Has 2920 Blast hits to 2915 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G63140.1

Model type: Protein coding
Short Description: purple acid phosphatase 29
Computational Description: purple acid phosphatase 29 (PAP29); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 14 (TAIR:AT2G46880.1); Has 636 Blast hits to 631 proteins in 208 species: Archae - 0; Bacteria - 277; Metazoa - 0; Fungi - 208; Plants - 117; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link: InterPro Scan - TAIR