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GT20304

CSHL Arabidopsis genetrap mutant lines

Original: GT20304

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20304

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4787200 [Map]; Strand: c
      • AT5G14800.1 - [+] show detail - pyrroline-5- carboxylate (P5C) reductase
        Distance: 0; Region: intron2 (CDS)
      • AT5G14800.2 - [+] show detail - pyrroline-5- carboxylate (P5C) reductase
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT20304 - 5-prime edge 
    CTCCCTGATT GATTATATGA TTGATTCATC AATGTAATTT TAGAGTTGAC 
    TTAAAGTTGC CCCTTTCATA TGATGTAATT AAGAAGGCTG TCACAGAATT 
    ACCCTCGAAG CTTTCAACAA TAATATTCTG GTTTCTGTTG CAGCTGGAAT 
    CAACTTGAAT GATTTACAGG TTTTGCATCA TTTATACTCC TATACATTTG 
    CCATTTAAGT TGTCACTATC CATGGTGTTG CATTGTGAGT TTCTAGAGCT 
    CAATTTGGTT AAAAAACATA AAGGTCTCTC CTTTTTGTTT TTAGGAATGG 
    TCTGGTCAAG ATCGATTCAT AAGGGTGATG CCTAATACAC CTGCCGCTGT 
    TGGTGAGGCA GCTTCAGGTA TAGTTTATCA GAGTGTTCGC ATTTGTGATA 
    TTTCTGAATT TTGTTTGTGA TTTCTGTTTC TCTCGGAATC TGTGGGGGGG 
    GTAAAATTAC CAATTATGTT GTGTGTAT

AT5G14800.1

Model type
Protein coding
Short Description
pyrroline-5- carboxylate (P5C) reductase
Curator Summary
Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.
Computational Description
pyrroline-5- carboxylate (P5C) reductase (P5CR); FUNCTIONS IN: pyrroline-5-carboxylate reductase activity; INVOLVED IN: response to salt stress, response to heat, proline biosynthetic process; LOCATED IN: cell wall, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7885 Blast hits to 7882 proteins in 2434 species: Archae - 115; Bacteria - 5234; Metazoa - 373; Fungi - 241; Plants - 70; Viruses - 0; Other Eukaryotes - 1852 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G14800.2

Model type
Protein coding
Short Description
pyrroline-5- carboxylate (P5C) reductase
Curator Summary
Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.
Computational Description
pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink).
Link
InterPro Scan - TAIR