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GT20413

CSHL Arabidopsis genetrap mutant lines

Original: GT20413

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20413

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2759072 [Map]; Strand: w
      • AT3G09032.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -975; Region: promoter
      • AT3G09035.1 - [+] show detail - Concanavalin A-like lectin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20413 - 5-prime edge 
    ATCTTAGAAA ATTCCATTTA GAACTAAAGA AGAGAGAGAG ATCCAGTTTC 
    TCGTCCCAGT TAAGCTATGG CCATGTTCAA AACCTTATCT TTTTTGTTCC 
    TTTT

AT3G09032.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09035.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin family protein
Computational Description
Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 816 Blast hits to 814 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 813; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR