1. Home
  2. Mutant Lines
  3. GT20497

GT20497

CSHL Arabidopsis genetrap mutant lines

Original: GT20497

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20497

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 850660 [Map]; Strand: c
      • AT3G03550.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20497 - 5-prime edge 
    CTAGATCTCG GAATGAGACG GTTAATGAAG GATCGACGCC GAAACCACCG 
    GAGATGCAGG ATTCAAGAGA CGGAGAAGAG CGGAGATCGG CGTCGTTAAA 
    CTCAGGCGGC GGTGTGGTAT CGATCGAAGA TATACTAAGG GAGATT

AT3G03550.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G17600.1); Has 9886 Blast hits to 9859 proteins in 306 species: Archae - 0; Bacteria - 2; Metazoa - 2318; Fungi - 804; Plants - 5150; Viruses - 98; Other Eukaryotes - 1514 (source: NCBI BLink).
Link
InterPro Scan - TAIR