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GT20590

CSHL Arabidopsis genetrap mutant lines

Original: GT20590

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20590

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 216536 [Map]; Strand: w
      • AT4G00467.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: -460; Region: promoter
    Flanking Genome Sequence: GT20590 - 5-prime edge 
    TTTCTCTCTG TCGACGAGTT TAATACGGCC CAAAAGCCCA CTAAACCTAA 
    TAGCCTATGA GGACCAAATC AATAACTTGA GGTTTAAGGT ACAACTTATT 
    ATGATAATGT CGGCAGAAAA ATTGCATTAG TAACTTTAAC AAATCCCACA 
    TCGGAAACAT ATGGAAATTT TAGCTCGTAT ATAAGACAGA TTAGTTCAAG 
    CATTAGTAAC CAATTGGCTT TGAGGTGGAT AAAGCTCATT AGCTTTCCCA 
    TGGGATCATG ATCCTTGACC CAATAGGGTT CATTCAAATT ACAATAGGAT 
    ATGTATATGA TCGGGAAAGA AGTTGAGCCG AAGCCAATTG TTTTTTTTTT 
    TCTTCTAAAA ATCCAAAAAG AAAAAGGGCT CAACCCATCC TTTAGGGAAC 
    CTTGGAAAAA TCCAATCCCC CCGGGATTTA GGAAAAATTT GGGTTTTGGG 
    TTTTTTTAAA AAAGAAAAAA

AT4G00467.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G63220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR