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GT20661

CSHL Arabidopsis genetrap mutant lines

Original: GT20661

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20661

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21111392 [Map]; Strand: c
      • AT5G51970.1 - [+] show detail - GroES-like zinc-binding alcohol dehydrogenase family protein
        Distance: -53; Region: promoter
      • AT5G51970.2 - [+] show detail - GroES-like zinc-binding alcohol dehydrogenase family protein
        Distance: -202; Region: promoter
    Flanking Genome Sequence: GT20661 - 5-prime edge 
    TAATGAAGTC ATAAGAAATA TTTTTTTCAT TTACTTTGGC TGGCTTCTTT 
    GAATCTCAGA ATATGCAATT GCTTCTGAAT TCTCTCACTT TGGTGGTTTC 
    CATCAAACAT AACAAGATCA TGAATATGTT CATGGAACAC ATCCTAAAAC 
    AAATGTGGTG CAACACTAAC AAAAAATTGT AACCCACACA ACTCGGATTT 
    GTCAATACTT AAAAGCTTAA AGGAAAAGAG CTCTCTGGCT TCATCTCACT 
    CGACCAATAA TCAAAAATTA ATTAAAGATC TGTACACAGA AATGAATAAA 
    TCATAATGAC TCATCCCCCA GAAAGACAAA GAGGAATGAA TGAATGATCA 
    AGGCTCGTAA ACTTCATGAA A

AT5G51970.1

Model type
Protein coding
Short Description
GroES-like zinc-binding alcohol dehydrogenase family protein
Curator Summary
Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.
Computational Description
GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G63620.1); Has 39885 Blast hits to 39871 proteins in 3071 species: Archae - 851; Bacteria - 26146; Metazoa - 1385; Fungi - 2785; Plants - 3263; Viruses - 3; Other Eukaryotes - 5452 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G51970.2

Model type
Protein coding
Short Description
GroES-like zinc-binding alcohol dehydrogenase family protein
Curator Summary
Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.
Computational Description
GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G63620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR