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GT20815

CSHL Arabidopsis genetrap mutant lines

Original: GT20815

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20815

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3370195 [Map]; Strand: w
      • AT3G10760.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20815 - 5-prime edge 
    CTTTCTCCCT GCTTGTCTGG ACCCGCAGCT GCATAAACGT TTCGTTGATG 
    CTGTTGCGCA TTTAGGGATT AAGAACGCAG TTCCTAAAAC GATTATGCAG 
    CTTATGAGTG TTGATGGTTT AACTAGAGAA AACAGTTGCG AGTCATTTGC 
    AAAAGTATAG ACTTTATCTT AACAGAATGC AAGGTTTGTC TTCTGGTGGT 
    GGTGCTGGTT CAGATCCAGC TACTGATCGT CTTTTCGCTA GCTCTCCTGT 
    TCCTGCTCAC TTTCTTCATC CTAATCGTGT TCCCAGTTCT GATCATTTCA 
    TGCCGTCTTT TGTTCCTATT GCTACTCTTC AACAACAACA ACAAATGGCT 
    GCTGCTGCGG CCGCTGCTGC AGCAGCTAAT CCTCATTTAC AACCGCCTCA 
    GTTCCACCGT CAAATCGCAG CTGCGCATTT TGGTTCACCG ACTAATGGTG 
    GATTC

AT3G10760.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR