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GT20822

CSHL Arabidopsis genetrap mutant lines

Original: GT20822

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20822

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9798 [Map]; Strand: w
      • AT1G01020.2 - [+] show detail - Arv1-like protein
        Distance: -1061; Region: intergenic
      • AT1G01030.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 1851; Region: intergenic
    Flanking Genome Sequence: GT20822 - 5-prime edge 
    CATTTTATAT TCTTTTGACA ACTATGCACA AGCCTTTTGA GACACATCTA 
    CACAATATAA TAGCACAAGC CTTTATGAGA CATATCTACA CAATATCATT 
    GCTACTTGTA GACTATTTGG AATACGTATT TACATATTCC ATTGTATCAT 
    CCCTTTGCAA ATGTTTTATA CATATAACTA ACATATACAT TATTCGTAAC 
    TTTGTTCCCC TATATCGAAA AATGTGGGCT ACACATATAA CTAACATATA 
    TATATATGTA TGTTTATATG ATATAGTCTC CATGTCTATA TATCTTATAT 
    ATTACATGTT TCATCTCTCT CGA

AT1G01020.2

Model type
Protein coding
Short Description
Arv1-like protein
Computational Description
ARV1; CONTAINS InterPro DOMAIN/s: Arv1-like protein (InterPro:IPR007290); BEST Arabidopsis thaliana protein match is: Arv1-like protein (TAIR:AT4G01510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01030.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
NGATHA3 (NGA3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G01500.1); Has 1380 Blast hits to 1379 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1380; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR