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GT20968

CSHL Arabidopsis genetrap mutant lines

Original: GT20968

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20968

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12013298 [Map]; Strand: w
      • AT2G28180.1 - [+] show detail - Cation/hydrogen exchanger family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT20968 - 5-prime edge 
    GACCAGAAAA TCAAGAATCC AAATGATCCA AGGCATCCTG CTACGTCGAT 
    TCTGTTTTTC GTGACCAAGA TATCCGCAAT GATCGAGTTC TCTCCCGATA 
    AAGTAACTAG AACATTCAAG AGTAGCCCTG CCTGCAATGC AACATCGATT 
    TTCTCAGCAG CAAACACACA AGTTTTGAAG AAAAAAAAAA AAAAAAAAAA 
    AAAAAAAAAA ACCCCAAAAC CTCCAAAAAG AAAAATTGGG AAAAAAAAAA 
    ACCCATTTTT TAAAAAAAAA ATTAAAGCCT TGGCCAAAAA AAAAAAAAAA 
    CAAAAAGAAA ATTCCCAGGT TTCGAAAAAA AATTTGGCCA AAAAAAAAAC 
    CCGGCCAATT AAAAAAAAAT TTTCCCCCAA AACCCTCCGA AAAAAAGTTA 
    AGGGGAAGGC CCCCCCAAAT TAACCCCACC AAATTTAACG TTTCCCCCAA 
    CCAAGCCCTT CCCAAATACC CTTTTTATTT CGGGACCCAA AGGGAAAAAA 
    CCCCCCCCCC CCTTAAGCCC CCCCCCCCCC CCATTCCCAA AAATCCGTTG 
    CCCCCCCCCC TAAAAACCCC CCAACTCCCG GGGCCGGGCC CGGTCCCCCT 
    TTCCCTGGAT TCAAAAATTT AAGGGGATTT TTGGCCAAAA GGGGAAAAAC 
    AAAAACAAAA AAATGGTGGG GTCCTTTTGA AAAACAAAAA ACAATTTGGA 
    AAAA

AT2G28180.1

Model type
Protein coding
Short Description
Cation/hydrogen exchanger family protein
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
ATCHX8; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 6A (TAIR:AT1G08140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR