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GT21069

CSHL Arabidopsis genetrap mutant lines

Original: GT21069

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21069

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1377177 [Map]; Strand: w
      • AT2G04100.1 - [+] show detail - MATE efflux family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT21069 - 5-prime edge 
    CATCAGTACG GAGAACAAAG AGTCATAAAT ATTTCAGATT GATATTAACC 
    TGGTCGTTCC AACTCATGCA AGCAGTGACT ATAGCTAGTA TGATTCCTTG 
    CGCCGTAGAC CCAACCACCA CACCGATCCA TAGCCCTTTA CCATTCATCT 
    CACTCGACCA TCCTAAGAAA AGTCCAACCG GAGCTCCTAG GAGATAGTAA 
    GCCACCACAT TTGCCCAAGC TCCAATATGT TGCCATCCAC TTCCCCTAGC 
    AACCCCTTTT CAAAAAGTCA TAACAAACAA AACACATTTT GAGTCGCGTA 
    GATCGATTCT TTTATTTGAT TTGCTAGTTA ATGGGTTTGA TTTTATTACC 
    ACCAAGCACT GCAGAAAATC CATCAACCAA AAATGAGATA CAAAGCAAAG 
    GAGATAGCGG TGGGACATAG TCCACAACTT CTTTGCTATT GCTGAAGGCG 
    TAGCCGAAGA TATCTCTACA AATGAAGAGA AGTGTGCTAC AAATGGTAGC 
    CTCTAGGAAC CAAAGGAATA TACCGGCAAA CACTGCCAGC CTCGCAACCT 
    CGGGATTCCC CGCTCCCAAT TCGTTTGAAA CCCGTATACT GCCAAGGGTA 
    AATAGTGAGA CTAATCTGAC AATTTCCAAA CAAACATTGA ATAAGTATTA 
    TCCGAATCAT ACCTTCCAGC CGCCCCAATA CCCATTGGAA TGACATAGTG 
    GAGAGATGAT GTTGTAAGAC TACATGAACA CAGCAACAAC AACCAAC

AT2G04100.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR