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GT21124

CSHL Arabidopsis genetrap mutant lines

Original: GT21124

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21124

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15059626 [Map]; Strand: c
      • AT2G35859.1 - [+] show detail
        Distance: 0; Region: exon1 (NonCoding)
      • AT2G35860.1 - [+] show detail - FASCICLIN-like arabinogalactan protein 16 precursor
        Distance: -137; Region: promoter
    Flanking Genome Sequence: GT21124 - 5-prime edge 
    GGGTGGGTGT GTTTTTTGCA TATTTTATTT TATATTTTTG GTAAGGGTAA 
    AAAGTTGGGT CTACACGAGA AGCAAAGGTT ATGTGTCGTG TCAAGTTGTT 
    TGGCTTATGC CTAACTCGGA GCCTCTCTCT CAGACAAAAG GTTTTTACTT 
    GCTTCTGTTG AACAACTCAG CACTATGCCT CTGTCTTCGA GCCTCGTGTC 
    GTGTTCTTCT CTCTCGACTA TCTGAACTTC ACTTGAAGTT AGAACTTTCC 
    ATCTTTGTAT TTTTTCTTGT AAACAACAGA TCAAAACGTA CGACTCAAAC 
    AATTGTAAAT CCAATTATTA GCTGCAATGT GTGCTATTTA CTATGATTAA 
    CTATTATACA ACATATGTTG TCACGTTGAA ATTTGATTTG CATTTCGAAT 
    TTTAAAATAC TATGGTACTA CTTATGCTTC ATTGATACAA CAAAATTCCA 
    TTCTTCGTGG CCACTTCTTT TGTTAATAAA TTCTTGAGAC TTTATCTTTT 
    GTACAACCAT TGAGACACAA AAACTACGTT AGGTGATTAG TTAGCAAAAT 
    AGATAAATCA AATTCGTTTT CATCTCACT

AT2G35859.1

Model type
Other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT2G35860
Link
InterPro Scan - TAIR

AT2G35860.1

Model type
Protein coding
Short Description
FASCICLIN-like arabinogalactan protein 16 precursor
Computational Description
FASCICLIN-like arabinogalactan protein 16 precursor (FLA16); INVOLVED IN: cell adhesion; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 15 precursor (TAIR:AT3G52370.1); Has 1005 Blast hits to 970 proteins in 256 species: Archae - 17; Bacteria - 426; Metazoa - 148; Fungi - 43; Plants - 238; Viruses - 1; Other Eukaryotes - 132 (source: NCBI BLink).
Link
InterPro Scan - TAIR