1. Home
  2. Mutant Lines
  3. GT21165

GT21165

CSHL Arabidopsis genetrap mutant lines

Original: GT21165

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21165

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28323718 [Map]; Strand: c
      • AT1G75450.2 - [+] show detail - cytokinin oxidase 5
        Distance: -5343; Region: intergenic
      • AT1G75460.1 - [+] show detail - ATP-dependent protease La (LON) domain protein
        Distance: -4168; Region: intergenic
    Flanking Genome Sequence: GT21165 - 5-prime edge 
    TTTAGAGTTG AGATTGGAAC GGAGAGAAGT GAGATTGAGA AGGGATTAGG 
    GATTGGGAAT TTTTTTCCCA AATTAAAACT TTCGATTTCC TCAATTTTAA 
    TGACTTTTTT CACCGTGTCA CATAAGATTT AAAAGAAAGC ATACTCAAGA 
    AAACATGTCA TTATATAATG GACCAAGACA ATACAATAGC TTGGAGAGCA 
    ATCATGTATA TAAAAGAAAG ACCCACATAA CCCCTTTTTT CTTAGGAACA 
    CTAATAAGTC ATTAACTTTA TAGGAAACCT AACTTGAACA TGTAATCTAA 
    GAGAAAAAAT ATTCAGTGAT GGCGAATAAT ATCTTGACCA AAATGATCAG 
    ATATACAAAA TAATTAGAAT TAAATCATGT ATGGGACACT TTTTGCATGG 
    GAAAGGTGGA TATGTTTGGT TCATGACCAA AAAAACTCGC AAGTGACAGT 
    TGTGTGTAAG GTCCACTAAT CAACTTAAAC TTGACATTAC AACATACTGT 
    CCATTCAAAT ATTATAACGA ATTATAATAA ATATATGCAC AAAATTTTCC 
    TAACCACTTA TATGGCTGAG AGACTGATTC GAAAAAGATG GTTTCGAACT 
    CAAAAAGGAA CCCACGATAT GCCATGATAA AGTTATACAT ACTCATTTCA 
    AACCAAAGGA ATAATTAAAT AAGTTGCATC AAAAGATTGA CGAGGCAGAG 
    TCTTTAGACT TTAGAGCAAA AGTGTTTAAA GTAATTGATG GTGTTCTTCG 
    TTCGTTTTTC AGAAAAGATT TATTTTTCTT ATAATAGTTC ATTTGGTC

AT1G75450.2

Model type
Protein coding
Short Description
cytokinin oxidase 5
Curator Summary
This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Computational Description
cytokinin oxidase 5 (CKX5); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1).
Link
InterPro Scan - TAIR

AT1G75460.1

Model type
Protein coding
Short Description
ATP-dependent protease La (LON) domain protein
Computational Description
ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G19740.1); Has 3715 Blast hits to 3715 proteins in 882 species: Archae - 0; Bacteria - 1742; Metazoa - 186; Fungi - 45; Plants - 112; Viruses - 0; Other Eukaryotes - 1630 (source: NCBI BLink).
Link
InterPro Scan - TAIR