1. Home
  2. Mutant Lines
  3. GT21171

GT21171

CSHL Arabidopsis genetrap mutant lines

Original: GT21171

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21171

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26840139 [Map]; Strand: c
      • AT5G67265.1 - [+] show detail - unknown protein.
        Distance: -303; Region: promoter
      • AT5G67270.1 - [+] show detail - end binding protein 1C
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: GT21171 - 5-prime edge 
    ATTCTCTCTC AGAGAATCTG TTCTATGTTT GAAAAAAATT CCCTATCCCT 
    CCTTATAAAC ATACTCTACT AGTACTCTGT TGAAAATATC ATTGTTGTGA 
    TGTTTTGTGG TCCTTATGGT ATAATATGTT TTGCCCCTAC AGTTTCACAT 
    CTTATTTGAT TAGTAGCAGT GCTGAATAAT TAAACATAAG TTTGTCCTAA 
    CACTTAGGCT GGCCTATTGA TATTTTGAGA GAAACAGAAA GACAAACGCA 
    AGAACCGGAC GTTCGTATAC CCAAAAATTA CGATTTTCTG CTCTTTTAGA 
    AAATTTCTTT TATAAATTTA ATTTCTGTTA CTTTTTCCTA AACTCCAGTT 
    AAAAAATTCT ATTACAATAT AGCTATGAAC CTAAAATCCA CGAAGGTATG 
    ATGAATTCAT CTTCTTTTAC TTCTTTGTAT TTTTCGTTTA GTAATATGAT 
    AAATCATTCA ATTGTAATAA AATTTGAAAC GGATTAATTA AATTGTAATA 
    TTTGTAATTT GATTTTACTT GTAAGGAAAT GGAGACTGAA AAAAGAAAAG 
    AGGATGGATC ATCATCAAAA GTGGTGGTGG AAACAACGGA GCAACGTTCC 
    TCGGCGGGGA AAGGCACAGA GCAAAGAAAT GTACAAGTGG TTCATCTCAC 
    TCGA

AT5G67265.1

Model type
Protein coding
Computational Description
unknown protein.
Link
InterPro Scan - TAIR

AT5G67270.1

Model type
Protein coding
Short Description
end binding protein 1C
Curator Summary
encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.
Computational Description
end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR