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GT21190

CSHL Arabidopsis genetrap mutant lines

Original: GT21190

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21190

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13321857 [Map]; Strand: w
      • AT4G26330.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT21190 - 5-prime edge 
    CATTAGCTCT TGCAACAACG TATTTCAATG GAGGGTAATT GCTCAAAAAT 
    CTTCTAAAAT GTTGTATTCG AATTCAATTC GTGTCACTTT CTATACATTT 
    TTAGAAGACA CTTGCAAATC CGTAGCTTAT TAGCAGCATT GGTGTATAAC 
    TGTAAGGACT GATATGTGCA GGGTTTGCAA ATGGGAAAAC TGGATGAAGA 
    AATTGGCCAA TGAGACAATA ATTCTGTGCT TTTCTACTTT GGGTCCGGTT 
    CAGTTCATTG AAGAAGCACA AGCTGCTGCT ATTAGAGCGA ACGCATTAGC 
    GCTAATATTT GCAGCCTCAC CAACCAGACA GCTCGCTGAA GAAGTAGACA 
    TGATCCCAAC AGTTCGTGTT GATATTCTTC ATGGGACTAG GATTAGGAAC 
    TATCTTGCTC GTTCGCCTAC GTAAGCCACA TTATTCGGTT ATACATTTTG 
    TTTCCATGCG CTGAGCTAAA AAACGGTTAG AGAAAAGAAA CTCATAAGAA 
    TTCTTTTGGT AAAAATGAAG AGTGCCAATG GTGAAAATTG GACCGAGCAA 
    AACGGTTATC GGAGAGACTA CAGCACCCTC CGTTGCATAT TTCTCTTCAA 
    GAGGACCTAG CTCACTATCA CCTGATATTC TCAAGGTACA ATCATCTACT 
    TTTTGGTT

AT4G26330.1

Model type
Protein coding
Short Description
Subtilisin-like serine endopeptidase family protein
Computational Description
UNFERTILIZED EMBRYO SAC 17 (UNE17); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, double fertilization forming a zygote and endosperm; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR