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GT21205

CSHL Arabidopsis genetrap mutant lines

Original: GT21205

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21205

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 417078 [Map]; Strand: c
      • AT4G00960.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 898; Region: intergenic
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: -1359; Region: intergenic
    Flanking Genome Sequence: GT21205 - 5-prime edge 
    TAATTTAGAT TTACAATTTG GGATAGATTT ATTTGATTTG AATTTGTTAA 
    TTGTTTTATT CATTTGCTAA ACATATTATT TTCATCCATA TGTCTTGCTT 
    AAATATCCTT TATTTCCTTT GATCTCGTAA AATTGTCTGT AACTTAATGT 
    ATATATGTTG TTTCTTATCT TTCTTTAAAT CTCGAAAGTG TAAACACATG 
    GAACAAAAAA AGGT

AT4G00960.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf; EXPRESSED DURING: LP.10 ten leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (TAIR:AT4G00970.1); Has 115688 Blast hits to 114341 proteins in 4243 species: Archae - 87; Bacteria - 12866; Metazoa - 42714; Fungi - 9727; Plants - 32895; Viruses - 425; Other Eukaryotes - 16974 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00970.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (CRK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 118247 Blast hits to 116820 proteins in 4488 species: Archae - 94; Bacteria - 12773; Metazoa - 43795; Fungi - 10171; Plants - 33437; Viruses - 407; Other Eukaryotes - 17570 (source: NCBI BLink).
Link
InterPro Scan - TAIR