1. Home
  2. Mutant Lines
  3. GT21291

GT21291

CSHL Arabidopsis genetrap mutant lines

Original: GT21291

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21291

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108511 [Map]; Strand: c
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (CDS)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT21291 - 5-prime edge 
    TCTCTTAGTC GAGATCTTCA CTTTCTGATG ACAATAGGGT CGTTTTTCTC 
    TTCTCTCTTA TTCTGGCGCA ATTCTCAGGT AACCTCAATC GACTATTCTC 
    TGTTCTACTC CTTTTTTCTT TATCATTTTA AAAATCCTAA CATTGAAAAT 
    AAAGTAGTTA AATAGAGTCA ACGAAAACAT TGTTAATGAA ACAGTGGTGT 
    GCTTAGCATA ACGAATCAGA CAGACAAAAA GTGTCTGGAT CCGTAGAGCA 
    AAGTGTTGTC GTGTCTTTGA CAAAGTTCTT TGTTTGCCTA AACCAATTTG 
    TTCATCCGAT AGAATGAATT GCATTCCGTT GTTACTATCA TCCAAACCGG 
    AGATGTCAAG CCCTAACCCT CAAGTAGTAT TTCTTAGAGA GCCATGAATT 
    GTTTGTTTAG ATCCAATTAG AAGAAGGTTT AGTTGACTGT GATGATTGTT 
    TGTGTTTTTG GTGGCAGGAC CAGGAGGCGC AGAGAGGGAG GATGCAGGAG 
    ATAGATCTTA GTGTTCACAC TATAAAGTCC CATGGAGGAA GAGTCGCTTC 
    TAAACACAAG CACGATTGGA TCATACTCGT CATCTTGATT GCCATCGAGA 
    TAGGCTTGAA CCTCATCTCT CCTTTCTACC GCTACGTGGG AAAAGACATG 
    ATGACTGACC TCAAGTACCC TTTCAAGGAC AACACCGTAC CTATCTGGTC 
    TGTCCCTGTG TACGCTGTGC TTCTTCCCAT CATAGTGTTC G

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR