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GT21302

CSHL Arabidopsis genetrap mutant lines

Original: GT21302

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21302

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 697601 [Map]; Strand: w
      • AT5G02970.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon7 (3UTR)
      • AT5G02980.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -392; Region: promoter
    Flanking Genome Sequence: GT21302 - 5-prime edge 
    CAAGCAGAAT TTTATACTAG ATGGCATTTT ACATTCCTAA AGATTTTAGT 
    TAAAGATGAT TTATCAATGG TTTTATTAGA TAAGTGAGCT ATATTTAATG 
    ACATGCTCAA GCAACCTTTA TATTTCGTTG TTCATCTCAC TCGACC

AT5G02970.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G09690.2); Has 911 Blast hits to 905 proteins in 207 species: Archae - 6; Bacteria - 480; Metazoa - 9; Fungi - 40; Plants - 329; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G02980.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G03000.1); Has 1509 Blast hits to 1431 proteins in 114 species: Archae - 6; Bacteria - 112; Metazoa - 223; Fungi - 29; Plants - 1128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR