1. Home
  2. Mutant Lines
  3. GT21320

GT21320

CSHL Arabidopsis genetrap mutant lines

Original: GT21320

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21320

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22610881 [Map]; Strand: c
      • AT3G61100.1 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: 0; Region: intron2 (CDS)
      • AT3G61105.1 - [+] show detail - pre-tRNA
        Distance: -529; Region: promoter
      • AT3G61110.1 - [+] show detail - ribosomal protein S27
        Distance: -753; Region: promoter
    Flanking Genome Sequence: GT21320 - 5-prime edge 
    GTTCGTACCC GCAGGTGATC ATTTCCTCTC CCTCTTTACA CTACTCACTC 
    CCCTTAGTTG TCTTAGATAT CTCCATTGAT ATAACTATGG TTTTCAGGAG 
    ATGCAAATGC GAGATATAAT AGGATGGTGA AGGATATTGA TAAATGGGCA 
    TTGGACAATG ATGAATCAGA TTTGATGGTG ATCTCACGAG TCAACTCGAA 
    GTTCGCCACT TATCTCGCAG ATTGGAAAGC CAAAGACTTG TACATTTTCG 
    GAGCAGAGCC AGAAAAAGCA CCAGGGAAAT GTAGCAACTG CAAAGTTACG 
    AGTTTGGACG AGCTTTTCAC TCAACAATGG GTTTGGGAAA GCCTATCACT 
    TGGAGGAGAC CCTATCACCC GAGCTTAGTT AGTTATTCAT CGTTTCAATC 
    GATTGTGAAT TCTACTTGTC ATTACCGACT CGAAATTGGA TTGTTTTAAC 
    ATTTTCGTAT CTTCTCATTA ATCAAAAGGG TGAATCTTGT TATAGTTCTT 
    AACGTTTTCT GTGTTACCAT TAAAAGTTTG TTGCTCCTTT CAATGCATTT 
    GCTGCTCTTA AACTCTCTCC TTTGCATGAA TATTGATTAA TCTTATAATA 
    A

AT3G61100.1

Model type
Protein coding
Short Description
Putative endonuclease or glycosyl hydrolase
Computational Description
Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G61090.1); Has 98 Blast hits to 98 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61105.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Leu (anticodon: AAG)
Link
InterPro Scan - TAIR

AT3G61110.1

Model type
Protein coding
Short Description
ribosomal protein S27
Curator Summary
Arabidopsis ribosomal protein
Computational Description
ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink).
Link
InterPro Scan - TAIR