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GT21351

CSHL Arabidopsis genetrap mutant lines

Original: GT21351

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21351

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2712825 [Map]; Strand: w
      • AT1G08570.3 - [+] show detail - atypical CYS HIS rich thioredoxin 4
        Distance: -58; Region: promoter
      • AT1G08570.1 - [+] show detail - atypical CYS HIS rich thioredoxin 4
        Distance: -67; Region: promoter
      • AT1G08570.2 - [+] show detail - atypical CYS HIS rich thioredoxin 4
        Distance: -67; Region: promoter
      • AT1G08570.4 - [+] show detail - atypical CYS HIS rich thioredoxin 4
        Distance: -105; Region: promoter
    Flanking Genome Sequence: GT21351 - 5-prime edge 
    CACTAATCCA CCGTTAGATC TTAAAATTCC AAATCCAAAA TGGACGGTCA 
    AGATCACTTA ACGAAAAAGA AAACAGTTTC CTGTCCAGAA ATGTCTAACC 
    TTGAGGCCTT TTTCTCTTTC CTTTCAACTT TTTTTTTTCA ATAATAAATT 
    TTCTCGGGAA GCTAATTTTT CCGGAAAAAA AAAGCGAAAC TTCGCTGGGA 
    ACAAAAAATG GCTGAAAAAA CACGTCGTCT CTGGGAAAAC TTTTTCTTTT 
    TCTTCGGGAA TATTCGGGAA ACAAATATGG TTTTTTCTTC TGATTAAAAA 
    ATAAAATGAC GGAAGGGATT AGCAAAACAA GTTTGTTCTT AGGAGCTTGG 
    GGAAATCATC ACCGGGTTGA TGATTTCTCT TTCTCTCCGG GGAGTTTTGG 
    GGGGTTTGGT TTGAAAAAAA GTTTCTCTTG TCTGAAGCTT AAAAGTCAAA 
    ACCCTCTAAA AATTGTATTT TACGGAAAAC AAATCGTTTT CGAAAATTCT 
    CAAAACAAAA GCTTCAAAAA ATCATCAGCT ATCACAGCTC AGGAAAACTT 
    AAAGGTTTT

AT1G08570.1

Model type
Protein coding
Short Description
atypical CYS HIS rich thioredoxin 4
Curator Summary
Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.
Computational Description
atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 2532 Blast hits to 2524 proteins in 582 species: Archae - 19; Bacteria - 596; Metazoa - 625; Fungi - 365; Plants - 524; Viruses - 3; Other Eukaryotes - 400 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08570.2

Model type
Protein coding
Short Description
atypical CYS HIS rich thioredoxin 4
Curator Summary
Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.
Computational Description
atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 2537 Blast hits to 2529 proteins in 580 species: Archae - 19; Bacteria - 606; Metazoa - 627; Fungi - 356; Plants - 522; Viruses - 3; Other Eukaryotes - 404 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08570.3

Model type
Protein coding
Short Description
atypical CYS HIS rich thioredoxin 4
Curator Summary
Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.
Computational Description
atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08570.4

Model type
Protein coding
Short Description
atypical CYS HIS rich thioredoxin 4
Curator Summary
Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.
Computational Description
atypical CYS HIS rich thioredoxin 4 (ACHT4); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast membrane, chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 3 (TAIR:AT2G33270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR