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GT21391

CSHL Arabidopsis genetrap mutant lines

Original: GT21391

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21391

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4037017 [Map]; Strand: c
      • AT3G12700.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: -53; Region: promoter
      • AT3G12700.2 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: -53; Region: promoter
    Flanking Genome Sequence: GT21391 - 5-prime edge
    GGGGCAGTTG TCCCCCCCCC TAAATTTTTG AATTTTCTTA AGCATTTTAA 
    GGAATTAAAT TAATTGCACC CCATAAAAAG ATTCTCTCTT GCCCCCTCTA
    AATTGTTTGT TTCCCAATTA ACCAATTCTG GTTATGGGGG GCAATTAATC
    TCTCCAATTT TCCCCTTTAA TGTAGCTAAT TTCTTTACAA ATTTAAATCC
    GAAAATTAAA ATAATGTAAT CTAAATGTTT AAATCATAAG ATTTCTTTCC
    CTTTGTATAA ACTCAAAAAT TAATATTTAA AAATTTTGAT CTCTTCCAAT
    AACTTTTGTT TCCCAATTAA CCAATTCTCG TTGACTAAAT ATTACATATC
    CCTTTAACAA AAAAAAAAAA AAAACCCTTT TTCCCTTTAA ATTAACAAAA
    TTTTTTTAAA ATTTTAAACC CAAAAAAAAA AAAACTAATT TAAATTTTAA
    AACCCAATTT TTTTTTTTCC TTTTTTTTAA ACCCAAAATT TTATTTTTAA
    AAATTTTTTT TTAAAAATTT AACAAAAAAA CTTTATTTAA TTTTTTTTAA
    TTTAAACCGA AAAAAAAAAC CTTTTAAAAA ACCTTAAAGG GTTTTTTTAA
    AAAAAAAAAA AACCCCCCCC C

AT3G12700.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G25700.1); Has 3537 Blast hits to 3526 proteins in 338 species: Archae - 0; Bacteria - 0; Metazoa - 933; Fungi - 442; Plants - 1963; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G12700.2

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G31450.1); Has 1235 Blast hits to 1233 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 149; Plants - 889; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR