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GT21450

CSHL Arabidopsis genetrap mutant lines

Original: GT21450

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21450

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23359329 [Map]; Strand: c
      • AT3G63220.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -91; Region: promoter
      • AT3G63220.2 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -181; Region: promoter
      • AT3G63230.1 - [+] show detail - Protein of unknown function (DUF581)
        Distance: -304; Region: promoter
      • AT3G63230.2 - [+] show detail - Protein of unknown function (DUF581)
        Distance: -304; Region: promoter
    Flanking Genome Sequence: GT21450 - 5-prime edge 
    TGTCAATTTC TCACACATGG TGTTGATGAA AAGAAAACGT TTTGATATTT 
    TGTGTGGAAA GCAGCAACCC AAAGAAAAAC ATAAAAAGGC CGGTACGGGG 
    GAGAATCATA AATGATGATT ATAAAATCGG TTTAGTAATA TCATAAACGT 
    AAAAACGACG ACGTAGCTTC TTTATTAAAA CCTTGTTCTC TCCTTGCTCT 
    TGTTGTTCCT TAACCTCGAT TTGATTTGAT TTGATTTGAT TCAATTGTCG 
    TCGTCCGGCA AAATCACAAG CTAACTTGTT TCTCCCGAGA GATATCTATC 
    ATCACAATCT CCTTCCTTCG TGTTCATCTC TCTCGACCAC GACTTCAGGT 
    AAAATTACCT CCAAATCTGT TGTTGGGTTA TTATGCTAAT CTAATCTAAT 
    TC

AT3G63220.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G16250.1); Has 6493 Blast hits to 4467 proteins in 250 species: Archae - 4; Bacteria - 460; Metazoa - 4606; Fungi - 8; Plants - 1152; Viruses - 24; Other Eukaryotes - 239 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63220.2

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G16250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63230.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF581)
Computational Description
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63230.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF581)
Computational Description
Protein of unknown function (DUF581); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650).
Link
InterPro Scan - TAIR