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GT21490

CSHL Arabidopsis genetrap mutant lines

Original: GT21490

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21490

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 361801 [Map]; Strand: w
      • AT2G01820.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -1120; Region: intergenic
      • AT2G01830.2 - [+] show detail - CHASE domain containing histidine kinase protein
        Distance: 1182; Region: intergenic
    Flanking Genome Sequence: GT21490 - 5-prime edge
    TTAAAAGATT AATGAGTACT TTGCATTGCA TGGTCTTAAT CTTCTCATGA 
    CTAATTTTGA CCAAACAAGA TAAATGTGAT TTTTTTGCAG TCCCGACAAA
    AAAGTTTTTA ACTGTAAAAG ACAGACGCCG TGAAATCCGG AGCATATTAG
    CCACGCATTA ATCTTCATTC GGCTGATTTT TTAACGGTCG TTATCTTACG
    CCGTTTACCA CAATTTTTAA TGTTTGTTAG GTTGGAGAGT TATTATTATT
    ACTTACCAGT TTCACTCTAA CCTAGAACTA TTCTTCTTCT TATGGTATTG
    AATGTCTGTT TTTATTCACT AGTAATAAAT ATTATAACTA TACTATTTTA
    AAAATAGTTA TAGTACGATA TGTAGAAATT GGGACATGTA TATTGTTGTT
    GTTAATCTTA TAGAAAAATA GTAAAAGTAG CTAAAGATTG GTGTATTATA
    CGCACCAACC ATATACTATA AACTCGCACG AAATGTAGAT CGAACACTTG
    TGTACGTAGA AAGATTACGT GACAACAACA ACTAGTCCAC TTTGCTGTTC
    GTTACGGTCA CACATCAACC ACATTTATTT CACTTACTTC TTTTTTCAAT
    CATTTCTTAA ATTCTCAATA ATTCTAAAAA TCAGATATTT GTCCAAACCT
    CTTTGGTGTA GTGGCACAAG GAAACTTTAA CTATTATACC TGAGTTTGAT
    TTTTCATGAA AACAATAACA TATTTGTT

AT2G01820.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: pollen development; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 179395 Blast hits to 141441 proteins in 4928 species: Archae - 173; Bacteria - 19044; Metazoa - 57542; Fungi - 11766; Plants - 68071; Viruses - 436; Other Eukaryotes - 22363 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01830.2

Model type
Protein coding
Short Description
CHASE domain containing histidine kinase protein
Curator Summary
Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane
Computational Description
WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 134660 Blast hits to 108037 proteins in 2975 species: Archae - 759; Bacteria - 119664; Metazoa - 32; Fungi - 2267; Plants - 2388; Viruses - 27; Other Eukaryotes - 9523 (source: NCBI BLink).
Link
InterPro Scan - TAIR