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GT21533

CSHL Arabidopsis genetrap mutant lines

Original: GT21533

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21533

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 157406 [Map]; Strand: c
      • AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon3 (CDS)
      • AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon3 (CDS)
      • AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon3 (CDS)
      • AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT21533 - 5-prime edge 
    TTGTGTGAAA ATCTGATCAT TGTTTGAGAG AGTTTCTTGC AATGGCAGGC 
    TTGCGTTTGT GAGACAGGAG GATCTCTTCT TTTCGCAGTT AACTGTCAGG 
    GAAACACTTT CTTTTGCAGC CGAGCTTCAG CTTCCGGAGA TCTCTTCTGC 
    TGAGGAGAGG GATGAGTATG TCAACAACCT CTTGCTCAAA CTTGGTCTGG 
    TGAGGTTTCA TTGATCTCTG CATTTTGGAT GATATTGTGG TAGATTGAAA 
    TCCTGGAATT ATGTTTCTTG ATCGTCTTTT GTGGCTCTCC AAAAGGTCAG 
    CTGTGCAGAT TCATGTGTTG GCGATGCTAA AGTTCGTGGG ATCAGCGGTG 
    GAGAGAAGAA GCGGCTGTCA CTTGCGTGTG AATTGATCGC TAGTCCCTCT 
    GTCATATTTG CTGATGAACC TACCACTGGT AAATGCCTAG TCTGTCTGAT 
    TCTGAACATT GATGGATTGT TTTAAAAAAG AATTAGAGGA TGATAAAATA 
    TTCTTGTGGT CTTCAGGGCT TGATGCCTTC CAGGCTGAGA AAGTGATGGA 
    GACATTGCAA AAGCTTGCAC AGGATGGACA TACTGTGATC TGCTCCATAC 
    ACCAGCCTAG AGGTTCGGTG TACGCTAAAT TTGACGACAT TGTGTTACTT 
    ACAGAAGGAA CTCTAGTCTA TGC

AT2G01320.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.2

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.3

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.4

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR