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GT21537

CSHL Arabidopsis genetrap mutant lines

Original: GT21537

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21537

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5159611 [Map]; Strand: w
      • AT1G14960.1 - [+] show detail - Polyketide cyclase/dehydrase and lipid transport superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT21537 - 5-prime edge 
    CATTGATCGT CACCGCCATA TTCTCGTCGT CCATCTCTAT CCTCTCCTTC 
    AATACTTCCT CTTTCCCATC TTCACCACAC ACGCAAACAC CACAACATTG 
    TATACTAATC AACATACACA TTTATATCTA ACCATAACCA AACCCTACTT 
    TTCCATGTTA AAACAAATAA CTTGTAAGGG AAACTCATGA ATATCACATA 
    TAGCTAGGTG TACCCTTTAA GTCATTTGTA TCATTATATA AAGAGAAAAA 
    GAGTATAAAT ACGAACCACG AGTGTAGTTC CAGATTTTGA TGGTGCCGTG 
    AGAGTCCCAA TCGCCGTCAT GGACGGTGAC ACCTTGGATG AGGTGGCCGA 
    TAGCTTCAGG GACGAGGTGG TTCTCGCTCC TCCACCTCTT ATAGTGTTTC 
    TCCGCCGATC CCTTAAGAGG CACATCCGTC ACGTATGTTC CCGACATCGC 
    CATTGATGAA TCAATTAGCT TTGGATTGTT TTTTGTG

AT1G14960.1

Model type
Protein coding
Short Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Computational Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT1G14950.1); Has 368 Blast hits to 339 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR