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GT21845

CSHL Arabidopsis genetrap mutant lines

Original: GT21845

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21845

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9910917 [Map]; Strand: c
      • AT1G28307.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 1790; Region: intergenic
      • AT1G28310.2 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: 981; Region: intergenic
    Flanking Genome Sequence: GT21845 - 5-prime edge 
    AGCATTCAAG TTCAAAATTC ACGTTCACAA TCTCCATGGT TCGAGTTGGG 
    GAGGATACTA GAAGAGGAAT ACACACATCT TCTTCTGTGC ATACTAGGAA 
    GCTTCGTTAA TATAGCCCCT AACAACTCTC TTGTACATTA TCTCTTATAT 
    ATTCTCAGCA ATATAGAACG ACTCCAATCA TCAAATGGAT TAACCTAGTT 
    AATCAAACAG GTTCCACGTA TGCGTCGAAT CTCATATAGA GCATCAGACG 
    TTCATGTCTC TCGACCAGAT TATTATTTTT TTGGTGGTTT CGTTAACATT 
    TCTTTTTCTA ACTTGTTTCA TCTCTCTCGA CAATTTGTTA ATTTCTTGTA 
    AGTACTCCTA ACTTTTCTCT ATAATGTTTT TTTTTAATAT GCATGATCAA 
    GAGCCGTGGC AACCTTACAA TAAGAGAACA CCAGTAAACC AAACAGGTAT 
    GCTAGCAAAT TAGGGATGCA AATCGATCCT TCAACCAACA TTTTGTAGAC 
    GCACATGATA TGAGTGCATG CTAGCCATCA TATAAGTTTA AAAGATAGAG 
    AACTATTTTA CCCATGTCAA AATTT

AT1G28307.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G28310.2

Model type
Protein coding
Short Description
Dof-type zinc finger DNA-binding family protein
Computational Description
Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR