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GT21929

CSHL Arabidopsis genetrap mutant lines

Original: GT21929

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21929

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 257293 [Map]; Strand: w
      • AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
        Distance: -653; Region: promoter
      • AT5G01690.1 - [+] show detail - cation/H+ exchanger 27
        Distance: -117; Region: promoter
    Flanking Genome Sequence: GT21929 - 5-prime edge 
    CTAAAGAGAA AAAAGAACAA GAGGATAAAC AACATGTACA ATTAAACCCC 
    TAAATATAGC TAGAGAGAGC AGAAAAAAAA AAAAAAAAAA AAAAAAAAAA 
    TTTCCTCTTT TCCTCCACCC CACAAACAAA CCCCCCCTTT CCCCCAAGGG 
    GTAAACCCTT TAGGGAAAAA CCCAACAGGG GGGAAGGGAA AAAAACCCCA 
    AAACTTTTCA AAACGGAAGA AGTGAAGGGG TTTGGAAACC CGGGGAAGGG 
    GGGGGGCCCC GGGGGAAGGG CCGGGGAAAA AAACCCCCCA AGTTGGCCCC 
    CCCCCCTCCC CCCCCCCC

AT5G01680.1

Model type
Protein coding
Short Description
cation/H+ exchanger 26
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 26 (CHX26); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 27 (TAIR:AT5G01690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01690.1

Model type
Protein coding
Short Description
cation/H+ exchanger 27
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 27 (CHX27); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 26 (TAIR:AT5G01680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR