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GT21957

CSHL Arabidopsis genetrap mutant lines

Original: GT21957

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21957

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 254572 [Map]; Strand: c
      • AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT21957 - 5-prime edge 
    ACGTCCGGAA TGCCTCACCT AGCTCCGTTG CGGTTCTAAT GGACCAAGGA 
    CGGCTTCCAG ATTTCAAGAA CATGGGAACG GCGATGAAGA ACGGCTCAAT 
    GAGGATCAAC ATCTGTTCAA TATTCCTCGG TGGAGCAGAC GACCGTGAGA 
    CACTGGCCTT TGCGGTTAGA ATGACAAACC AACCTTACGT AAACCTAACC 
    GTTCTTCTCC CTCGACCAGG TGAAAACGTC TCACACCTAA ACGACGTCGT 
    ATAGAAAAGA CTCGATTTCA GAACCATCGA AAAATTCCGT CAAGACACCA 
    TGAACAAACA CAATGTCGCT TTACGAGAGG TAAACACACA AGTCTTGACT 
    CCGTTTCTCC GGTTTTCAAA TCCGGATTAG ATTTAACCGT TCATCTCTCT

AT5G01680.1

Model type
Protein coding
Short Description
cation/H+ exchanger 26
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 26 (CHX26); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 27 (TAIR:AT5G01690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR