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GT22001

CSHL Arabidopsis genetrap mutant lines

Original: GT22001

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22001

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 707844 [Map]; Strand: w
      • AT5G03020.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22001 - 5-prime edge 
    GGAGGCTTCA GAGGCTCCAT GCCCACAGAT ATTGAGAACT CAGGAGAAGT 
    TTATGATCCA AAGACCAATA CTTGGGAGCC TTGCTCACAT CACTTGATCT 
    CACTGTTCAA AATGTTTTCA AGAAAAAACA TTACTTTACG ACCAAGGCAT 
    GCTTAGTGAT TAATAAGGTG TCGTGCCTAC TATATGTTTC CGATGGGAAG 
    CTATATTGGC GTGAAGACAA GGAAGGTTTT GAGTGCCGTA AGGTTTATGG 
    ACTTGCAGAA CAGTCCTCTA ATCTGTTTCG TGTGGTGGCA AACTCCGGCG 
    GCGGAGGAAG AGTGACAGTT TGGTGGAAGT CGATGACAAA AGGTTGCGAG 
    TTTGACTGTC TGCTGACTGA GGAGTGTGAA ACCAAGATTT GGTGTGCAGA 
    GATTTCGCTT GAGAGAAGAG GTTTAAGAGA GCTTCGGGGA TTTGTTGAAT 
    GGTCTAAAGA GGTTTTTACC ATTGATAGAT GTGACTATAT TTACGATTTC 
    ATCT

AT5G03020.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G03000.1); Has 6713 Blast hits to 4194 proteins in 283 species: Archae - 8; Bacteria - 340; Metazoa - 4606; Fungi - 65; Plants - 1341; Viruses - 147; Other Eukaryotes - 206 (source: NCBI BLink).
Link
InterPro Scan - TAIR