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GT22056

CSHL Arabidopsis genetrap mutant lines

Original: GT22056

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22056

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2127877 [Map]; Strand: w
      • AT3G06740.1 - [+] show detail - GATA transcription factor 15
        Distance: 410; Region: intergenic
      • AT3G06750.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 1746; Region: intergenic
    Flanking Genome Sequence: GT22056 - 5-prime edge 
    CTTAGTTCAA CATATTACAT CAAAGGTTTC ACGTGACTGT TCCAGGATTG 
    GGCTCATTGA TGCCATTTTT GTATAAATTT TAATTATATA AAACTAGATA 
    TTGCTTTATA ACAACAATCA ATATTTTAAA AAACGGGGTT ATACATGAAA 
    TGGGCTGGCC CAACGTTGAA TCTGTCGAAA ACTTTACCTA GATTTTTCTT 
    TCTGAAGTCC ATGGAACCAA CTTACTAACA ACATAAATGA AACAAACTTT 
    TATTTTGTCA ACTCATAAAC TACTTAATCT ATACTTTATT CATCTCACTC 
    GA

AT3G06740.1

Model type
Protein coding
Short Description
GATA transcription factor 15
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06750.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; Has 6317 Blast hits to 3436 proteins in 319 species: Archae - 0; Bacteria - 429; Metazoa - 2195; Fungi - 739; Plants - 2175; Viruses - 83; Other Eukaryotes - 696 (source: NCBI BLink).
Link
InterPro Scan - TAIR