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GT22164

CSHL Arabidopsis genetrap mutant lines

Original: GT22164

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22164

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 177985 [Map]; Strand: c
      • AT4G00400.1 - [+] show detail - glycerol-3-phosphate acyltransferase 8
        Distance: -1132; Region: intergenic
      • AT4G00413.1 - [+] show detail - pseudogene, similar to tomato ripening associated membrane protein, blastp ma...
        Distance: 54; Region: intergenic
    Flanking Genome Sequence: GT22164 - 5-prime edge 
    ATCTGTGGTG CCATCTTTAA GACTAGTGAA TATCGGCGCA TCTTTAAGCC 
    TAGTGAATTT CGGCCCATCT TCAAGACTAG TATGGAGGCC TGTTAAGGGT 
    CTTCTAATAC AGCTCAACAA GCCTTTTTGT GTAAGCCTAG TGAATTTGTA 
    ATACACTTTG TCTCTGGTCA AACACTTTCA TGCGTTTTTT TTATAAATAT 
    GTTTAATGAG CATAAATGTG CGGCTCAAAG CGGTGCAACT CCCAACGGTC 
    AAATAAACAA ATTAAGCTCA ATTGCTCAAG TAGTGAGAAC AAGATCAACC 
    TAACTTGCAC AACGAAGAAT TTTTGTTGTT GTTGTGGTCA TATATATTTT 
    TACACTAACT AATTATTTTG ACAAAAGTAA TCAATTTGTG ACATTCTACA 
    AAAAAATATA TATAAATAAT CGAATATAAT TTTTCTATTG GTCAAAATAT 
    CGATTGCAAA ATACAAAAAT CAAGGCATAA CAAGTTAATG TATAAATTAT 
    AGTCGTGTTT TAAAATTAAG TCGTGTGTTT TGCGGTTTTG TCCTCGATTT 
    TGTTCCTTCC TCGCTCTCGA ACTAAATCAT ACATTTTATA GAGAGGTCTT 
    CTTGACCCTA ATCCACGTGG GATTTTGACT CGAGCCACCG TCTCTATTGA 
    AATGATAAGA TCGTTTCTAG AATGAGGTTA CGGCCCGTAT TGGTC

AT4G00400.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 8
Curator Summary
Involved in cutin assembly. Is functionally redundant with GPAT4.
Computational Description
glycerol-3-phosphate acyltransferase 8 (GPAT8); FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, cutin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 4 (TAIR:AT1G01610.1); Has 380 Blast hits to 369 proteins in 27 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00413.1

Model type
Pseudogene
Computational Description
pseudogene, similar to tomato ripening associated membrane protein, blastp match of 91% identity and 4.3e-11 P-value to GP|395044|emb|CAA52067.1||X73847 tomato ripening associated membrane protein {Lycopersicon esculentum}
Link
InterPro Scan - TAIR