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GT22366

CSHL Arabidopsis genetrap mutant lines

Original: GT22366

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22366

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13468054 [Map]; Strand: w
      • AT5G35205.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT22366 - 5-prime edge 
    CCATCAAATC ATCAGCAAAA CAAAGGTGTG TGAGTTTCAG CAACTTACAA 
    TTCGGGTGGT AGATTATGTG TTTGTCCTCA GCCGCTTTGG CTATCTTGGG 
    GGATAACACG TTCATGCATA TAACAAATAG ATATGAACTT AGTGAACAGC 
    CTTGCCTGAG TCCTCTTTCG CTTCCAAAAT ATTCGGCTAG CTCTCCATTA 
    ACTTGCAATG AAAAAGAGGC TGTTGTTACA AAGGTCTGAA TCCAATGAAT 
    ATACTTCTCC GGGATGTCTA GAGCTTTCAG CGTATTGAGC AAAAAACTCC 
    ATTGGACTGA ATCAAAGGCT TTAAATATAT CAATATTCAT CTCACTCCAC 
    GAAGAGACTG TGTCTTTGTG ATAATCTTTA ATGATCTCAG TGGCAAGGAG 
    TAGGTTCTCC ATTAGAAGTC TTTCTTTGAC AAAAGCTGAC TGATTTGCAG 
    AAATAAACTT TGGCAGAATG GTCTTGAGGC GATTCGCTAA AATCTTCGAT 
    ATGACTTTAT ACAAGACATT GCAACATGAG ATTGGCATGT AATCCTTCAT 
    GAATACAGCT TCTTTTTTCT TAGGTATCAG TGCTAAGATG GTCGAATTGA 
    CTCCTTTTGG TAGAAATACG GTTTTAAAGA AAGATTGGAT AGCCACCACA 
    AAATCATTCC CCACTGTTTT CCAAGTCTCT TTGAAGAATT CACAAGTAAA 
    TCCATCTGGA CCAGGGGATT TATTACT

AT5G35205.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.1e-36 P-value blast match to GB:BAA20419 reverse transcriptase (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR