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GT22377

CSHL Arabidopsis genetrap mutant lines

Original: GT22377

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22377

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2600542 [Map]; Strand: c
      • AT3G08560.1 - [+] show detail - vacuolar H+-ATPase subunit E isoform 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT22377 - 5-prime edge 
    GATATTGAGG GGGAGAAATG ATAAACATAT ATACAAACCT CAATGATGAG 
    ACTCTTAAGA AGCTTCTTGG AATTGGTCTT CTCGCTCGAC CAACGGAGAA 
    GATCCTTAGC TGCGGAGTCT TTCATGGCAG TGACAACGTC ATCTTGAGCT 
    TGGAGGGACT TAATCCTACT TGGATTCAGT TGGGTGGAGT AGTCGCTGAA 
    GAGAAACATA TATGGAATGA ATTAAAAGCC ATAGCAAAAG GAGAAGGAGA 
    TAGATGAAGG AAGGGGAGGG GAGATG

AT3G08560.1

Model type
Protein coding
Short Description
vacuolar H+-ATPase subunit E isoform 2
Computational Description
vacuolar H+-ATPase subunit E isoform 2 (VHA-E2); FUNCTIONS IN: hydrogen-exporting ATPase activity, phosphorylative mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuole, mitochondrial proton-transporting ATP synthase complex; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, vegetative cell; EXPRESSED DURING: pollen developmental stages, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar ATP synthase subunit E1 (TAIR:AT4G11150.1); Has 759 Blast hits to 757 proteins in 292 species: Archae - 68; Bacteria - 19; Metazoa - 249; Fungi - 151; Plants - 127; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink).
Link
InterPro Scan - TAIR