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Mutant Lines
GT22387

GT22387

CSHL Arabidopsis genetrap mutant lines

Original: GT22387

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22387

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 19916392 [Map]; Strand: c
- AT5G49138.1 - [+] show detail - other RNA
  Distance: 0; Region: exon1 (NonCoding)
- AT5G49130.1 - [+] show detail - MATE efflux family protein
  Distance: 0; Region: exon2 (CDS)

ATAGAGAGAT GCGACACGAG TGATATCATG TGTGTGTGGC GGAGCATCAG 
CATTAGAGGC GCGAGGTTTA GCCAGAGGAG TGATATGGGA AGAGAAGCTA 
AGAGAAGGAG GAAGATGGTT CGCTTGAGGG TTAAGGAAGC GAGAGAAGGG 
TTTTTAGAAC CGATGGCTTG ACCACATAAT GGTTCCATAC CGGTGGCTAA 
ACCAGAGAGG ACGGAGTAAC CGGTGATGTT GGTGAAACCG ATGGCTAAGG 
CTCCTCCTGC GAGCTCAAGG CTACCGAGTC GTCCCATACA CACGACGGAT 
GTCATGTTCT TTAGGTAGTT TAATATGCTC ATGGCGGCCA CCGGAAAACT 
TATGTCCCAA ATTCTCTTCA TCTCACTCG

AT5G49130.1

Model type: Protein coding
Short Description: MATE efflux family protein
Computational Description: MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G71870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Phenotypes

Morphological phenotypes

Determination of insertion point(s)

AT5G49130.1

AT5G49138.1