Home
Mutant Lines
GT22406

GT22406

CSHL Arabidopsis genetrap mutant lines

Original: GT22406

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22406

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 357602 [Map]; Strand: c
- AT4G00840.1 - [+] show detail - DHHC-type zinc finger family protein
  Distance: -323; Region: promoter
- AT4G00850.1 - [+] show detail - GRF1-interacting factor 3
  Distance: 0; Region: exon1 (5UTR)

TTTTATAATT CACCAATCAA AACTCTGAGA CCGTGAAACC CTAAAGTTTC 
TTCTCTCTCT ACTAACAAAA CAATACTTCT GAGTGATAGA ATTGGTTTAA 
GAGCCCAATG CAAAACAAAC TGATGCCAAA ATATTCAACA AACGAATATT 
TTGGATTATC CTTAAATTTA AGACTTTTGA TTTGTTTGAA TTTCGCCGAC 
GAGGTTTCTG GGAAATCGTA GGACAAAAAA GTCCCCCAAC CAATTAATTT 
GTCTCCCCCA CCGAATGTAC ACGTGGCACC TTGTCTGATT TTTCGTCAGC 
TCTACGATAA CCAAAAAAAG ACAACATTTG TAGCTGTTAT TATTTATTGG 
CCCTGTTAAT GGGCCTTATA AAGAATTATG AAAGCTTCTG TGTCAAGAAG 
AAGGTTACTT TAAATCTGTA TCAATATCAG CTCCACGACG GCGATTCGTC 
GTTGTCCTCC GAACCAAGCA AACTCCGATC CCTCACCGTG GCTCCGGATA 
TTTTACGGCG GTTGTTCCCG GCTCGGACTC GAAGAATTGG CCGGATTCTC 
CCTTTGACCA GGCTGGAGAT GAACCTTTTC CGGTTCTGCT CCGGTCTGAA 
AGTCCTCGGC TATTTCATGA TCCTT

AT4G00840.1

Model type: Protein coding
Short Description: DHHC-type zinc finger family protein
Computational Description: DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00850.1

Model type: Protein coding
Short Description: GRF1-interacting factor 3
Curator Summary: Arabidopsis thaliana GRF1-interacting factor 3 (GIF3) mRNA
Computational Description: GRF1-interacting factor 3 (GIF3); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 2 (TAIR:AT1G01160.1); Has 414 Blast hits to 414 proteins in 93 species: Archae - 0; Bacteria - 2; Metazoa - 279; Fungi - 27; Plants - 81; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link: InterPro Scan - TAIR