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GT22429

CSHL Arabidopsis genetrap mutant lines

Original: GT22429

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22429

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26561167 [Map]; Strand: w
      • AT1G70480.1 - [+] show detail - Domain of unknown function (DUF220)
        Distance: -657; Region: promoter
      • AT1G70480.2 - [+] show detail - Domain of unknown function (DUF220)
        Distance: -892; Region: promoter
    Flanking Genome Sequence: GT22429 - 5-prime edge
    TTCTTAACCA ATTAGTTTTC TTTAGGTCGG GGTTGAGACT TATCACTTAT 
    GGAACGGTTT TCATCTCTCT CGACTAATTT TTGTAAAGCT CCCTTTTTTA
    TAAACACTTC GTTGATTCCT GAAGTATCAA ATGATATGCC AGAAACTTCT
    CTAGGAGAGG TAAACCAATA TTCCAAATAA TAGGAAATTG TTAGCACGGT
    GTCTGTAGGA TTTGCACCTA AATGACTTGT TCAAGATACT AATTTAATGA
    ACAAAAAATA TAACATATAC GGGAGGACAT ACTTACTTTG GCACGTTCAA
    GAACATCACA AATCTCTTGA GCATTGACTA AGATCCGGAG TTTCCAAGGT
    TCTTCCG

AT1G70480.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF220)
Computational Description
Domain of unknown function (DUF220); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF220) (TAIR:AT1G23560.1); Has 170 Blast hits to 157 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70480.2

Model type
Protein coding
Short Description
Domain of unknown function (DUF220)
Computational Description
Domain of unknown function (DUF220); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF220) (TAIR:AT1G23560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR