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GT22435

CSHL Arabidopsis genetrap mutant lines

Original: GT22435

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22435

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2904647 [Map]; Strand: c
      • AT3G09440.2 - [+] show detail - Heat shock protein 70 (Hsp 70) family protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G09440.1 - [+] show detail - Heat shock protein 70 (Hsp 70) family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT22435 - 5-prime edge 
    ATTTGAAGTG AAGGCGACTG CAGGAGACAC TCCTCTTGGT GGTGAGGATT 
    TCGACAACAG AATGGTGAAT CACTCCGTTC AAGAGTTCAA GAGGAAGAAC 
    AAGAAGGACA TTAGTGGAAA CCCGAGAGCT CTAAGGAGGT TGAGAACCGC 
    CTGTGAGAGA GCGAAGAGGA CTTTGTCATC TACGGCTCAG ACCACCATCG 
    AAATCGACTC TCTGTTCGAT GGTATTGACT TCTACGCTCC TATCACCCGT 
    GCCAGATTCG AGGAGCTTAA CATAGATCTC TTCAGAAAGT GTATGGAGCC 
    TGTTGAGAAG TGTCTTCGTG ATGCTAAGAT GGACAAGAAC TCAATCGATG 
    ATGTTGTCCT TGTTGGTGGC TCAACCCGTA TCCCCAAGGT CCAGCAATTG 
    CTCGGCGGCT TCTTCAACGG CAAGGAGCTT TGCAAATCTA TCAACCCCGA 
    TGAGGCTGTT GCATATGGTG CTGCTGTCCA GGCAGCTATT CTCAGTGGTG 
    AGGGTAATGA GAAGGTTCAA GATCTCCTCT TGCTT

AT3G09440.1

Model type
Protein coding
Short Description
Heat shock protein 70 (Hsp 70) family protein
Computational Description
Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to karrikin, response to heat; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34172 Blast hits to 33801 proteins in 4833 species: Archae - 161; Bacteria - 16465; Metazoa - 3857; Fungi - 1750; Plants - 1254; Viruses - 309; Other Eukaryotes - 10376 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09440.2

Model type
Protein coding
Short Description
Heat shock protein 70 (Hsp 70) family protein
Computational Description
Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to karrikin, response to heat; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1).
Link
InterPro Scan - TAIR