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GT22437

CSHL Arabidopsis genetrap mutant lines

Original: GT22437

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22437

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1991891 [Map]; Strand: w
      • AT4G04145.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT22437 - 5-prime edge 
    TTACAGATGT GTTACTGTGG TTTCTAAATT ATTATATTTT CCTTTGTTTT 
    AGTTTTCAAT ATTAGTTTGC GTGACTTCTG GTCTTGACCT AGCTAGTCAA 
    GTGAAAACTT CAACAAAGTT TCGTCGAAAA ATAAAAACTC ATAAAATTGT 
    CTCGAAGTTA TATCTCATTT CTTCTCACTC GACTATACGA AGGTGTATGG 
    GTCAATCTTC TTCTTCTACT TCTCGGAATT GGCTATACGA CGCCTTTCCG 
    AGCTTCAGCG GAGAAGATAT CCGTCAAACA TTCCTCAGCC ACTTTCTCAA 
    GGAGCTTGAC CGGAAACTGA TCATTTCTTT TAAATATAAC GAGATCAAGA 
    GAAGCCAATC GCTTGATCCC GATCTTAAAC GAGCGATTAG GGATTCTCTG 
    ATAGACAAGG GAATACGTAT TATTCACTTG CCATATGTGT ATTGATATTA 
    CTTAGAGAAC ATTCTTGTAT ATGTGTATAT ATTGTATAAC CAATGAATAG 
    AGAAAGGGCA TCAAGATTTC TAAGTAACAT GGTATCAGAG CCTTCTCTCT 
    AAAACCTAAA ATTCTCAGCA GCCGCCACTC TCAAAATTCT TTCTTCTTCT 
    TTCACAAACA CTCTGTTTCT TCGTTTCTTC CTCTGTTCCT CTACTCAACC 
    ATGGCTCAAG CAATCGACAA AGTTTTCACT GTGACTCACA TCAAGTCACA 
    CATTCCTCTT GTTCTCGACA TGCACAAGAT GAACTACGAC GCATGGCGTG 
    AGTTATTTGA AACTCACTGC TACAGTTTTG GAGTCTTCGG ACATCTCGAC 
    GGCACGTCCA CACCAGCAAA CGCCGCCCAC ATGA

AT4G04145.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.8e-189 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays)
Link
InterPro Scan - TAIR