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GT22486

CSHL Arabidopsis genetrap mutant lines

Original: GT22486

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22486

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26806863 [Map]; Strand: w
      • AT5G67180.1 - [+] show detail - target of early activation tagged (EAT) 3
        Distance: -2614; Region: intergenic
      • AT5G67190.1 - [+] show detail - DREB and EAR motif protein 2
        Distance: 2272; Region: intergenic
    Flanking Genome Sequence: GT22486 - 5-prime edge 
    CGGAGCTAGT GGTTGTAAAA AACTTTTTTT GTCTCGCATT GGAAATCAAG 
    AAACTGATGG GTGCACTAAA GCCGATATAT TTATATTCCT ATTCGAGAAA 
    CTTTCTATAA ATAAACTGTT TTTTTATATA TTCGACCAAT GCATCCAACT 
    CGATTTCCAA GTAGTACATA CCACAATGGT ATAAGGCATC GCACTAGAAT 
    TCGACAAATA AGAAAAAGAT AAATCAGACT TGTACAATAT CGATAGGGGC 
    ATATGAATAT ATTTTGAATT TTTGTTTTCA TTTTTTGAAA TCTTTTATTA 
    CAATTTACAA AGTCATCTTT TTACTTTTTC AGTTATTGCA ATTGCACGAT 
    GCCTCACCTT CATCTCACTC GA

AT5G67180.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 3
Computational Description
target of early activation tagged (EAT) 3 (TOE3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G36920.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67190.1

Model type
Protein coding
Short Description
DREB and EAR motif protein 2
Curator Summary
encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.
Computational Description
DREB and EAR motif protein 2 (DEAR2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cooperatively regulated by ethylene and jasmonate 1 (TAIR:AT3G50260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR