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GT22513

CSHL Arabidopsis genetrap mutant lines

Original: GT22513

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22513

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 530482 [Map]; Strand: w
      • AT1G02530.1 - [+] show detail - P-glycoprotein 12
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT22513 - 5-prime edge 
    TGGTGGATGA TTACTGGAGA GAGACAAGCC GCAAAGATAA GAAGTAACTA 
    TCTGAAAACA ATTCTGAGAC AAGACATCGG ATTCTTCGAT GTTGAAACAA 
    ACACAGGAGA GGTTGTTGGT AGAATGTCTG GAGATACTGG TCATATTCAA 
    GATGCCATGG GTGAGAAGGT AATGCAGCTA ACAGAGAAAC TTCCGTATTG 
    CGATTTCAGG CTTAGATATA ATGATTGGAT TCGTTTTTGA AGTTTGTTAC 
    ACTTTTCTTG AATGTTGCAG GTGGGGAAGT TTATTCAGCT GGTATCTACT 
    TTCGTTGGCG GATTTGCTTT AGCTTTTGCT AAAGGATGGT TGCTAACATT 
    GGTTATGTTA ACTTCGATTC CTTTTCTGGC TATGGCTGGT GCAGCCATGG 
    CGCTTTTAGT GACTCGAGCT T

AT1G02530.1

Model type
Protein coding
Short Description
P-glycoprotein 12
Computational Description
P-glycoprotein 12 (PGP12); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 834511 Blast hits to 387558 proteins in 4042 species: Archae - 14726; Bacteria - 649276; Metazoa - 18491; Fungi - 13092; Plants - 9791; Viruses - 35; Other Eukaryotes - 129100 (source: NCBI BLink).
Link
InterPro Scan - TAIR