Home
Mutant Lines
GT22523

GT22523

CSHL Arabidopsis genetrap mutant lines

Original: GT22523

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22523

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 355457 [Map]; Strand: c
- AT1G02020.1 - [+] show detail - nitroreductase family protein
  Distance: -488; Region: promoter
- AT1G02020.2 - [+] show detail - nitroreductase family protein
  Distance: -488; Region: promoter
- AT1G02030.1 - [+] show detail - C2H2-like zinc finger protein
  Distance: 0; Region: exon1 (CDS)

TTCTCTCTGC TCGGAGGTCA CAAAAGATCT CACGCTTCCG CTAATAATGA 
ATTCACGAGA CCATTAAGAA TAATAATTAG CTTGATAGAT CTAAATCTCC 
CACCTTTAAC GGAGGAGGAA GAGATGGCCT CGTCGGTTTT TTAATGCTTG 
ATCAGATTGG TCAAACTATA GTAATTACTA CCTTTGATTC CAAGTAATGT 
AGTAAAATTC TCCAAGTGTA CGTATTGAGG ACAAATTTTG ATGTGGTCAA 
AGAACACAAG TGAGTTAGGT AATGAGGGAA ATCATGTGAT AGTAGTCGAT 
TTGTGTGGGA AAATGGTAAA GCATGAAAGC GTGATCGAGT GACGTGGTTT 
GTTGTTGCTC AAGTCGTGTG TTTCGTTATG CCAATGAAAT AAAAAAAGAT 
TTTTTTAAAT TACTTATATA CTCTTATTTA GGGAATTTTG CCGACTAAGA 
GACAGAGAGA CCACCGTAAC TTTTGGACAA CAAAAAAGCT CTAACGAGTC 
ACGCCTTTAG ATTGCACTTT CTTCTTCTTC TTTAAAAAAA GGAAAGAAAA 
CAAAGGTGTA ATTGCAGTGG AGTTGTTCCC CAAGTCACAG AGAGAAATCA 
CAGGCAATTT TGGTTATCCC TTAACCGGTC CATCCATATC TGAACCGTCC 
CGGTACAAAG ATCCGTTGGT TTCTGGTTTT GAGATGTCGA ATCCCAGACA 
GAGGAAAGG

AT1G02020.1

Model type: Protein coding
Short Description: nitroreductase family protein
Computational Description: nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 762 Blast hits to 681 proteins in 314 species: Archae - 126; Bacteria - 594; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02020.2

Model type: Protein coding
Short Description: nitroreductase family protein
Computational Description: nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02030.1

Model type: Protein coding
Short Description: C2H2-like zinc finger protein
Computational Description: C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G60580.1); Has 3215 Blast hits to 2725 proteins in 143 species: Archae - 0; Bacteria - 4; Metazoa - 2130; Fungi - 20; Plants - 967; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link: InterPro Scan - TAIR