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GT22599

CSHL Arabidopsis genetrap mutant lines

Original: GT22599

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22599

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 107910 [Map]; Strand: c
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon2 (CDS)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22599 - 5-prime edge 
    TAGGCTTGAA CCTCATCTCT CCTTTCTACC GCTACGTGGG AAAAGACATG 
    ATGACTGACC TCAAGTACCC TTTCAAGGAC AACACCGTAC CTATCTGGTC 
    TGTCCCTGTG TACGCTGTGC TTCTTCCCAT CATAGTGTTC GTCTGCTTCT 
    ACCTGAAGAG GACATGTGTG TACGATCTGC ACCACAGCAT CCTCGGGCTG 
    CTCTTCGCCG TCTTGATAAC TGGTGTCATC ACTGACTCCA TCAAGGTAGC 
    CACCGGACGC CCTCGTCCTA ACTTCTACTG GCGCTGCTTC CCCGACGGCA 
    AAGAGCTGTA TGATGCGTTG GGAGGTGTGG TATGCCACGG CAAGGCAGCT 
    GAGGTCAAGG AAGGCCACAA GAGCTTCCCG AGCGGACACA CTTCCTGGTC 
    CTTTGCGGGG CTTACATTCC TTTCCCTTTA CCTCTCTGGC AAAATCAAGG 
    CCTTCAACAA TGAAGGACAT GTGGCTAAAC TCTGCCTCGT GATCTTCCCT 
    CTGCTTGCCG CTTGTCTTGT GGGGATATCT CGTGTGGATG ACTACTGGCA 
    CCACTGGCAA GATGTCTTCG CAGGAGCTCT CATTGGCACC CTTGTAGCCG 
    CCTTCTGCTA CCGTCAGTTC TACCCCAACC CTTACCACGA AGAAAGATGG 
    GGTCCCTACC CCTATTTCAA GGCAGCTCAA GAACGAGGAG TCCCTGTGAC 
    CTCCTCCCAA AACGG

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR