GT2266

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

stunted plants with delayed flowering

Anatomical entity /structure development stage	Phenotypes
sporophyte vegetative stage (PO:0007134)	abnormal (PATO:0000460)
whole plant flowering stage (PO:0007016)	late (PATO:0000693)

Original: GT2266

Determination of insertion point(s)

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT2266 - 5-prime edge
```
TCTAAATCCT TTTTTCCCTT TCAT
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 1253736 [Map]; Strand: c
- AT3G04610.1 - [+] show detail - RNA-binding KH domain-containing protein
  Distance: 0; Region: exon2 (CDS)

CCTGAGCATC TTGAGTCTCT ACAGAAATCA GAGCCTGAAG AAGATGCGAC 
AGTTGGAGGT GAGGAGAAGA GGTGGCCGGG ATGGCCCGGA GAGACGGTAT 
TCCGTATGCT GGTTCCTGCA CAGAAAGTGG GTAGCATCAT TGGTCGCAAA 
GGTGATGTCA TTAAGAAAAT AGTTGAGGAG ACAAGGGCTC GAATAAAGAT 
TCTCGATGGT CCTCCAGGCA CAACAGAAAG AGCTGTGAGT CTCTAAATCC 
TTTTTTCCCT TTCATGTTAT ATGAGTTGCA GCTATTAGTC ATATAATGCT 
CTTGAACTAA AACTAAAATC CTAGTGATA

AT3G04610.1

Model type: Protein coding
Short Description: RNA-binding KH domain-containing protein
Computational Description: flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink).
Link: InterPro Scan - TAIR